CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



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General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.




Other options

 Map Options
 Map Options

Map Set Pinus pinaster-INIA_Oria6_2014  (Reference Set)
Min. Correspondence
Align Vertically
Stack
Maps LG5
Start
Stop
Magnification
Flipped




 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence
Always Display
SNP
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes




 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes




 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).




 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes









Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Pinus pinaster - INIA_Oria6_2014 [ View Map Set Info ]
Map Name: LG5
Map Start: 0.00 cM
Map Stop: 149.61 cM
Features by Type:
81 SNP
81 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 81.       of 4 | Next
Pinus pinaster - INIA_Oria6_2014 - LG5
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
m965 SNP 8.67 No other positions
i12910s978pg SNP 0.00 No other positions
i12910s1070pg SNP 0.21 No other positions
F51TW9001B21AG-1159 SNP 1.22 No other positions
BX665999-157 SNP 1.24 No other positions
BX251859-1235 SNP 1.81 No other positions
i11020s878 SNP 2.27 No other positions
i12888s893pg SNP 4.08 No other positions
i11426s280pg SNP 5.29 No other positions
AL750490-461 SNP 6.17 No other positions
AL749862-292 SNP 6.17 No other positions
F51TW9001AKMI8-1595 SNP 7.13 No other positions
F51TW9001AKMI8-606 SNP 7.17 No other positions
F51TW9001B5SDZ-379 SNP 9.20 No other positions
i10207s1272pg SNP 11.55 No other positions
m1216 SNP 15.37 No other positions
m629 SNP 16.33 No other positions
i10973s1146 SNP 25.58 No other positions
i15275s705pg SNP 26.43 No other positions
i12818s425pg SNP 36.93 No other positions
BX784243-247 SNP 42.73 No other positions
F51TW9002G33Q5-600 SNP 42.82 No other positions
CT578311-1056 SNP 45.68 No other positions
BX682445-112 SNP 48.15 No other positions
CT583534-187 SNP 48.59 No other positions

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