CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



Save link

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General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.




Other options

 Map Options
 Map Options

Map Set Pinus pinaster-INIA_Oria6_2014  (Reference Set)
Min. Correspondence
Align Vertically
Stack
Maps LG6
Start
Stop
Magnification
Flipped




 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence
Always Display
SAMPL
SNP
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes




 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes




 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).




 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes









Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Pinus pinaster - INIA_Oria6_2014 [ View Map Set Info ]
Map Name: LG6
Map Start: 0.00 cM
Map Stop: 116.88 cM
Features by Type:
86 SNP
2 SAMPL
88 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 88.       of 4 | Next
Pinus pinaster - INIA_Oria6_2014 - LG6
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
i11895s179 SNP 0.00 No other positions
BX252510-1069 SNP 1.08 No other positions
BX679017-1148 SNP 1.08 No other positions
F51TW9001AV518-166 SNP 1.09 No other positions
i15393s138 SNP 1.94 No other positions
i11486s713pg SNP 9.75 No other positions
i12168s1024pg SNP 9.75 No other positions
i17956s183 SNP 9.75 No other positions
F51TW9001AX401-1249 SNP 10.32 No other positions
BX681024-566 SNP 10.34 No other positions
BX252910-510 SNP 10.40 No other positions
FN695696-762 SNP 11.87 No other positions
F51TW9001B4T2Q-216 SNP 11.94 No other positions
BX249094-597 SNP 13.49 No other positions
CT578882-1043 SNP 14.99 No other positions
F51TW9001CHEL9-1043 SNP 16.68 No other positions
BX255383-177 SNP 16.83 No other positions
F51TW9001A1C6F-966 SNP 16.83 No other positions
i10503s25_seq SNP 16.88 No other positions
BX251340-1321 SNP 18.40 No other positions
BX677873-917 SNP 31.91 No other positions
BX251576-1311 SNP 32.40 No other positions
CT575951-769 SNP 39.88 No other positions
F51TW9001AVTK4-241 SNP 39.88 No other positions
F51TW9001AVTK4-181 SNP 40.23 No other positions

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