CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



Save link

* Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link.



General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.




Other options

 Map Options
 Map Options

Map Set Pinus pinaster-INIA_Oria6_2014  (Reference Set)
Min. Correspondence
Align Vertically
Stack
Maps LG7
Start
Stop
Magnification
Flipped




 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence
Always Display
eSSR
SAMPL
SNP
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes




 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes




 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).




 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes









Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Pinus pinaster - INIA_Oria6_2014 [ View Map Set Info ]
Map Name: LG7
Map Start: 0.00 cM
Map Stop: 126.66 cM
Features by Type:
109 SNP
1 eSSR
1 SAMPL
111 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 111.       of 5 | Next
Pinus pinaster - INIA_Oria6_2014 - LG7
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
CT576711-125 SNP 0.00 No other positions
BX251816-660 SNP 0.05 No other positions
CT581193-1012 SNP 0.92 No other positions
i11168s1245pg SNP 1.36 No other positions
i13430s117 SNP 1.56 No other positions
BX682573-1078 SNP 3.99 No other positions
BX000576-200 SNP 9.48 No other positions
BX000576-1732 SNP 9.53 No other positions
i11154s1228pg SNP 10.37 No other positions
i18912s345 SNP 10.97 No other positions
i19239s341 SNP 13.05 No other positions
m671 SNP 24.21 No other positions
BX254718-251 SNP 24.49 No other positions
BX249132-1065 SNP 24.50 No other positions
CT578566-1104 SNP 24.50 No other positions
BX249132-1091 SNP 24.53 No other positions
BX677540-225 SNP 24.61 No other positions
FN696780-419 SNP 28.89 No other positions
F51TW9001BD81M-249 SNP 28.89 No other positions
m80 SNP 29.53 No other positions
F51TW9001BD81M-783 SNP 29.92 No other positions
CT574693-1456 SNP 30.61 No other positions
F51TW9001BD81M-312 SNP 31.98 No other positions
F51TW9001C4TBD-1199 SNP 39.68 No other positions
CT580178-1105 SNP 41.28 No other positions

CMap Contact

Evoltree    BioGeCo    INRA    logo_ff    logo_gmod