CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



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General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.




Other options

 Map Options
 Map Options

Map Set Pinus pinaster-INIA_Oria6_2014  (Reference Set)
Min. Correspondence
Align Vertically
Stack
Maps LG8a
Start
Stop
Magnification
Flipped




 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence
Always Display
SNP
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes




 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes




 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).




 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes









Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Pinus pinaster - INIA_Oria6_2014 [ View Map Set Info ]
Map Name: LG8a
Map Start: 0.00 cM
Map Stop: 42.68 cM
Features by Type:
38 SNP
38 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 38.       of 2 | Next
Pinus pinaster - INIA_Oria6_2014 - LG8a
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
i13252s160pg SNP 0.00 No other positions
i10850s1207pg SNP 0.13 No other positions
i11998s204 SNP 0.19 No other positions
i11998s456 SNP 0.20 No other positions
i11853s995pg SNP 0.90 No other positions
i13845s830 SNP 2.59 No other positions
i13845s652 SNP 3.14 No other positions
CT575028-207 SNP 3.16 No other positions
CT575028-371 SNP 3.23 No other positions
CT575141-99 SNP 8.37 No other positions
CT575141-341 SNP 8.45 No other positions
BX678934-790 SNP 10.03 No other positions
BX678934-481 SNP 10.53 No other positions
i11013s188pg SNP 13.78 No other positions
i14166s363pg SNP 13.86 No other positions
BX251190-622 SNP 14.32 No other positions
i08906s326pg SNP 16.56 No other positions
BX252347-1190 SNP 17.20 No other positions
BX252347-1006 SNP 17.24 No other positions
BX251190-660 SNP 18.29 No other positions
BX251719-1055 SNP 21.67 No other positions
BX251719-1586 SNP 21.97 No other positions
i11945s890pg SNP 21.98 No other positions
BX679585-950 SNP 23.11 No other positions
384_Dhn2-264 SNP 24.61 No other positions

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