CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



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General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.




Other options

 Map Options
 Map Options

Map Set Pinus pinaster-INIA_Oria6_2014  (Reference Set)
Min. Correspondence
Align Vertically
Stack
Maps LG8b
Start
Stop
Magnification
Flipped




 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence
Always Display
SAMPL
SNP
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes




 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes




 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).




 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes









Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Pinus pinaster - INIA_Oria6_2014 [ View Map Set Info ]
Map Name: LG8b
Map Start: 0.00 cM
Map Stop: 80.35 cM
Features by Type:
45 SNP
1 SAMPL
46 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 46.       of 2 | Next
Pinus pinaster - INIA_Oria6_2014 - LG8b
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
F5V9AAZ01BLAVC-89 SNP 0.00 No other positions
F51TW9002G7LOJ-544 SNP 0.47 No other positions
BX254728-891 SNP 2.62 No other positions
BX254728-1302 SNP 2.69 No other positions
BX254586-1299 SNP 4.95 No other positions
m913 SNP 5.25 No other positions
i11115s82pg SNP 5.49 No other positions
i11115s146pg SNP 5.96 No other positions
BX252221-1003 SNP 6.24 No other positions
BX252221-182 SNP 6.24 No other positions
AL750591-840 SNP 6.44 No other positions
F51TW9001B2AXP-340 SNP 6.65 No other positions
m492 SNP 12.92 No other positions
i11535s678pg SNP 13.87 No other positions
FN695474-1274 SNP 15.07 No other positions
i10594s535 SNP 15.84 No other positions
E40-CATA_184 SAMPL 30.29 No other positions
i13311s398pg SNP 31.34 No other positions
i13217s887pg SNP 31.34 No other positions
F51TW9001DHJG8-1242 SNP 32.98 No other positions
F51TW9001DHJG8-1311 SNP 33.00 No other positions
BX252245-679 SNP 33.50 No other positions
i12202s964pg SNP 43.54 No other positions
i09979s949pg SNP 44.17 No other positions
i12989s409pg SNP 44.88 No other positions

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