CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



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General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.




Other options

 Map Options
 Map Options

Map Set Pinus pinaster-INIA_Oria6_2014  (Reference Set)
Min. Correspondence
Align Vertically
Stack
Maps LG10
Start
Stop
Magnification
Flipped




 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence
Always Display
eSSR
SAMPL
SNP
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes




 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes




 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).




 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes









Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Pinus pinaster - INIA_Oria6_2014 [ View Map Set Info ]
Map Name: LG10
Map Start: 0.00 cM
Map Stop: 143.11 cM
Features by Type:
65 SNP
1 eSSR
3 SAMPL
69 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 69.       of 3 | Next
Pinus pinaster - INIA_Oria6_2014 - LG10
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
BX679618-443 SNP 0.00 No other positions
CT575880-1377 SNP 6.26 No other positions
BX676885-841 SNP 13.38 No other positions
BX681924-1104 SNP 15.70 No other positions
CT577731-309 SNP 18.24 No other positions
m110 SNP 18.59 No other positions
CT579214-1058 SNP 18.87 No other positions
BX784194-3028 SNP 18.97 No other positions
BX255601-1425 SNP 19.11 No other positions
CT583571-1032 SNP 19.13 No other positions
E44-GATA_158 SAMPL 19.69 No other positions
AL750473-140 SNP 20.37 No other positions
i18690s303 SNP 20.83 No other positions
FN695503-954 SNP 27.86 No other positions
A6F03 eSSR 29.12 No other positions
CR392319-502 SNP 36.73 No other positions
i12120s254pg SNP 39.98 No other positions
F51TW9001A074I-1012 SNP 40.39 No other positions
F51TW9001AF6YM-1442 SNP 40.39 No other positions
CT578714-2353 SNP 46.50 No other positions
i10284s523pg SNP 50.21 No other positions
BX255014-583 SNP 50.21 No other positions
AL749993-1502 SNP 50.44 No other positions
AL749993-1482 SNP 50.45 No other positions
FN693842-1188 SNP 50.79 No other positions

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