CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



Save link

* Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link.



General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.




Other options

 Map Options
 Map Options

Map Set Pinus pinaster-INIA_Oria6_2014  (Reference Set)
Min. Correspondence
Align Vertically
Stack
Maps LG11a
Start
Stop
Magnification
Flipped




 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence
Always Display
SAMPL
SNP
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes




 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes




 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).




 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes









Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Pinus pinaster - INIA_Oria6_2014 [ View Map Set Info ]
Map Name: LG11a
Map Start: 0.00 cM
Map Stop: 49.73 cM
Features by Type:
26 SNP
1 SAMPL
27 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 27.       of 2 | Next
Pinus pinaster - INIA_Oria6_2014 - LG11a
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
FN696474-163 SNP 0.00 No other positions
FN696474-359 SNP 0.07 No other positions
F51TW9001ANBBN-172 SNP 2.11 No other positions
i17878s353 SNP 7.56 No other positions
i12573s863pg SNP 14.24 No other positions
i12573s615pg SNP 14.42 No other positions
BX254194-1519 SNP 14.47 No other positions
BX254194-1903 SNP 14.47 No other positions
F51TW9002JFSUI-165 SNP 16.21 No other positions
BX249576-876 SNP 16.22 No other positions
F51TW9002GF1P4-361 SNP 17.26 No other positions
i09812s1238pg SNP 23.74 No other positions
i03386s420 SNP 23.92 No other positions
F51TW9001CPNHA-239 SNP 26.59 No other positions
CT581549-897 SNP 30.66 No other positions
m973 SNP 36.68 No other positions
E40-CATA_286 SAMPL 37.82 No other positions
i11229s582pg SNP 40.80 No other positions
i13356s796 SNP 42.36 No other positions
i10118s552 SNP 44.62 No other positions
BX250083-1023 SNP 45.84 No other positions
BX255081-219 SNP 45.84 No other positions
F51TW9001CWC3X-581 SNP 46.09 No other positions
BX251153-597 SNP 48.30 No other positions
384_Korrigan-1801 SNP 48.51 No other positions

CMap Contact

Evoltree    BioGeCo    INRA    logo_ff    logo_gmod