CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



Save link

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General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.




Other options

 Map Options
 Map Options

Map Set Pinus pinaster-INIA_Oria6_2014  (Reference Set)
Min. Correspondence
Align Vertically
Stack
Maps LG11b
Start
Stop
Magnification
Flipped




 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence
Always Display
SNP
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes




 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes




 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).




 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes









Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Pinus pinaster - INIA_Oria6_2014 [ View Map Set Info ]
Map Name: LG11b
Map Start: 0.00 cM
Map Stop: 49.72 cM
Features by Type:
22 SNP
22 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 22 of 22.
Pinus pinaster - INIA_Oria6_2014 - LG11b
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
BX249083-664 SNP 0.00 No other positions
BX251173-142 SNP 5.33 No other positions
F51TW9002GU2AK-470 SNP 15.56 No other positions
BX252216-1659 SNP 15.60 No other positions
i13232s811 SNP 22.68 No other positions
BX253264-152 SNP 24.02 No other positions
CT577256-73 SNP 24.03 No other positions
BX679748-1058 SNP 24.05 No other positions
AL749873-490 SNP 34.48 No other positions
i09872s2006 SNP 35.20 No other positions
i10806s461pg SNP 37.54 No other positions
i10965s818pg SNP 39.02 No other positions
F5X2MQL01BWPXM-294 SNP 39.26 No other positions
CT577155-557 SNP 39.32 No other positions
i10965s361pg SNP 39.33 No other positions
CT580852-122 SNP 40.67 No other positions
F51TW9001A45MK-12 SNP 41.89 No other positions
F51TW9001A45MK-365 SNP 41.91 No other positions
BX678173-266 SNP 44.88 No other positions
BX250094-1197 SNP 47.86 No other positions
BX682661-1382 SNP 48.55 No other positions
BX677559-67 SNP 49.72 No other positions

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