CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



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General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.




Other options

 Map Options
 Map Options

Map Set Pinus pinaster-INIA_Oria6_2014  (Reference Set)
Min. Correspondence
Align Vertically
Stack
Maps LG12
Start
Stop
Magnification
Flipped




 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence
Always Display
SNP
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes




 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes




 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).




 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes









Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Pinus pinaster - INIA_Oria6_2014 [ View Map Set Info ]
Map Name: LG12
Map Start: 0.00 cM
Map Stop: 70.52 cM
Features by Type:
58 SNP
58 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 58.       of 3 | Next
Pinus pinaster - INIA_Oria6_2014 - LG12
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
BX682294-2364 SNP 0.00 No other positions
BX682294-2513 SNP 0.00 No other positions
BX250457-430 SNP 2.31 No other positions
F51TW9001C9D02-130 SNP 3.35 No other positions
i16008s735pg SNP 6.17 No other positions
m1196 SNP 7.23 No other positions
F51TW9001DWHC9-226 SNP 7.93 No other positions
BX252283-216 SNP 8.07 No other positions
i16008s577pg SNP 8.40 No other positions
i12210s651 SNP 11.39 No other positions
CT576920-125 SNP 12.53 No other positions
F51TW9001BMBKQ-295 SNP 17.16 No other positions
CR354615-1225 SNP 18.90 No other positions
BX249194-1335 SNP 20.71 No other positions
BX682906-875 SNP 22.42 No other positions
F51TW9001B1U5X-203 SNP 22.42 No other positions
BX249219-959 SNP 26.21 No other positions
BX249219-682 SNP 26.65 No other positions
i10186s805pg SNP 27.53 No other positions
CT575514-1126 SNP 28.91 No other positions
CT582485-784 SNP 28.98 No other positions
i11105s1113pg SNP 29.24 No other positions
BX678466-676 SNP 29.88 No other positions
FN692908-701 SNP 30.29 No other positions
FN692908-1107 SNP 30.35 No other positions

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