CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



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General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.




Other options

 Map Options
 Map Options

Map Set Picea glauca-LM2_SB_2012  (Reference Set)
Min. Correspondence
Align Vertically
Stack
Maps pg_12
Start
Stop
Magnification
Flipped




 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence
Always Display
SNP
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes




 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes




 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).




 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes









Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Picea glauca - LM2_SB_2012 [ View Map Set Info ]
Map Name: pg_12
Map Start: 0.00 cM
Map Stop: 131.67 cM
Features by Type:
131 SNP
131 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 131.       of 6 | Next
Picea glauca - LM2_SB_2012 - pg_12
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
PGLM2-1398 SNP 0.00 No other positions
PGLM2-0674 SNP 0.25 No other positions
PGLM2-0037 SNP 1.10 No other positions
PGLM2-1473 SNP 1.25 No other positions
PGLM2-0534 SNP 1.83 No other positions
PGLM1-0593 SNP 2.57 No other positions
08pm04486a SNP 3.07 No other positions
PGLM0-0465 SNP 3.17 No other positions
08pm05970m SNP 3.25 No other positions
PGLM0-0591 SNP 3.75 No other positions
PGLM2-0680 SNP 8.60 No other positions
PGLM2-0909 SNP 9.50 No other positions
PGLM0-0270 SNP 9.78 No other positions
PGLM0-0258 SNP 11.07 No other positions
PGLM0-0035 SNP 11.29 No other positions
PGLM2-0882 SNP 12.13 No other positions
PGLM2-1148 SNP 12.81 No other positions
PGLM2-0864 SNP 14.27 No other positions
PGLM2-0763 SNP 14.39 No other positions
PGLM2-1330 SNP 14.48 No other positions
PGLM2-1103 SNP 14.98 No other positions
PGLM2-0548 SNP 15.73 No other positions
08pm00456m SNP 16.04 No other positions
PGLM2-1003 SNP 17.21 No other positions
PGLM2-1187 SNP 17.22 No other positions

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